Preheat your oven to 350°F and line four wells of a mini muffin tin with parchment paper liners.
In a small mixing bowl, stir together the almond flour, melted coconut oil, and sea salt until the mixture is crumbly and holds together when pressed.
Distribute the crust mixture evenly among the four liners and pack it down firmly into a solid layer using the back of a small spoon.
In a separate medium bowl, whisk the Greek yogurt, egg, maple syrup, vanilla extract, and lemon zest until the batter is completely smooth and slightly aerated.
Pour the yogurt mixture over the prepared almond crusts, filling each muffin liner nearly to the top.
Gently place two fresh raspberries into the center of each cheesecake bite, pressing them down so they are partially submerged in the batter.
Bake for 16 to 19 minutes until the edges are set and the tops appear slightly golden, while the centers still have a very faint jiggle.
Allow the bites to cool in the pan for 15 minutes, then transfer to the refrigerator for at least 2 hours to ensure they are fully set and creamy before serving.